Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AO062_11310 | Not Available | Positive | 2468356 - 2468988 | 23555.6 |
| lysr family transcriptional regulator | AO062_11315 | Not Available | Negative | 2469007 - 2469945 | 34530.0 |
| mfs transporter | AO062_11320 | Not Available | Positive | 2470057 - 2471274 | 40712.8 |
| amidohydrolase | AO062_11325 | Not Available | Positive | 2471453 - 2472721 | 45998.8 |
| creatinine amidohydrolase | AO062_11330 | Not Available | Positive | 2472741 - 2473604 | 31303.6 |
| abc transporter substrate-binding protein | AO062_11335 | Not Available | Positive | 2473666 - 2474652 | 35650.9 |
| nitrate/sulfonate/bicarbonate abc transporter atp-binding protein | AO062_11340 | Not Available | Positive | 2474672 - 2475505 | 30488.2 |
| abc transporter atp-binding protein | AO062_11345 | Not Available | Positive | 2475502 - 2476320 | 29351.1 |
| fad-binding protein | AO062_11350 | Not Available | Positive | 2476329 - 2477699 | 49571.0 |
| restriction endonuclease | AO062_11355 | Not Available | Positive | 2477925 - 2478839 | 32400.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
