Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | AO062_11260 | Not Available | Positive | 2457244 - 2458572 | 46012.0 |
| acid phosphatase | AO062_11265 | Not Available | Positive | 2458577 - 2459443 | 29874.7 |
| hypothetical protein | AO062_11270 | Not Available | Positive | 2459571 - 2460254 | 22848.6 |
| tat pathway signal protein | AO062_11275 | Not Available | Positive | 2460340 - 2461362 | 35504.5 |
| lysr family transcriptional regulator | AO062_11280 | Not Available | Negative | 2461384 - 2462289 | 33475.6 |
| abc transporter substrate-binding protein | AO062_11285 | Not Available | Positive | 2462477 - 2463493 | 35074.4 |
| amidase | AO062_11290 | Not Available | Positive | 2463515 - 2465062 | 55001.9 |
| aspartate aminotransferase | AO062_11295 | Not Available | Negative | 2465076 - 2466422 | 47191.4 |
| amino acid transporter | AO062_11300 | Not Available | Positive | 2466552 - 2467184 | 21866.4 |
| phenazine biosynthesis protein phzf | AO062_11305 | Not Available | Positive | 2467216 - 2468064 | 30270.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
