Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO062_10900 | Not Available | Negative | 2366817 - 2368070 | 44598.2 |
| maleylacetate reductase | AO062_10905 | Not Available | Negative | 2368120 - 2369187 | 37029.8 |
| mfs transporter | AO062_10910 | Not Available | Negative | 2369209 - 2370183 | 34710.0 |
| betaine-aldehyde dehydrogenase | AO062_10915 | Not Available | Negative | 2370221 - 2371684 | 52549.0 |
| hydroxyquinol 1,2-dioxygenase | AO062_10920 | Not Available | Negative | 2371780 - 2372787 | 37706.4 |
| hydroxyquinol 1,2-dioxygenase | AO062_10925 | Not Available | Negative | 2372810 - 2373319 | 18886.4 |
| lysr family transcriptional regulator | AO062_10930 | Not Available | Negative | 2373477 - 2374427 | 35037.4 |
| hypothetical protein | AO062_10935 | Not Available | Positive | 2374803 - 2375048 | 8496.8 |
| hypothetical protein | AO062_10940 | Not Available | Positive | 2375061 - 2375312 | 9232.31 |
| cytochrome c biogenesis protein | AO062_10945 | Not Available | Negative | 2375325 - 2377088 | 62192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
