Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqe | AO062_10795 | Not Available | Negative | 2330441 - 2331610 | 43288.9 |
| pyrroloquinoline quinone biosynthesis protein pqqd | AO062_10800 | Not Available | Negative | 2331588 - 2331857 | 10080.0 |
| pyrroloquinoline quinone biosynthesis protein pqqc | AO062_10805 | Not Available | Negative | 2331854 - 2332591 | 28311.6 |
| pyrroloquinoline quinone biosynthesis protein pqqb | AO062_10810 | Not Available | Negative | 2332596 - 2333516 | 32810.4 |
| dehydrogenase | AO062_10815 | Not Available | Negative | 2333686 - 2335911 | 78097.0 |
| trehalose utilization | AO062_10820 | Not Available | Negative | 2336001 - 2337065 | 37830.4 |
| abc transporter substrate-binding protein | AO062_10825 | Not Available | Negative | 2337221 - 2338261 | 37997.8 |
| iclr family transcriptional regulator | AO062_10830 | Not Available | Positive | 2338369 - 2339151 | 27651.7 |
| hypothetical protein | AO062_10835 | Not Available | Negative | 2339168 - 2346304 | 228285.0 |
| hypothetical protein | AO062_10845 | Not Available | Negative | 2354137 - 2357064 | 95929.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
