Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate dehydrogenase | AO062_10745 | Not Available | Negative | 2320605 - 2321948 | 48027.4 |
| hypothetical protein | AO062_10750 | Not Available | Positive | 2322181 - 2322672 | 18438.2 |
| abc transporter substrate-binding protein | AO062_10755 | Not Available | Negative | 2322729 - 2323748 | 36518.1 |
| iclr family transcriptional regulator | AO062_10760 | Not Available | Negative | 2323794 - 2324576 | 27246.1 |
| abc transporter substrate-binding protein | AO062_10765 | Not Available | Positive | 2324774 - 2325757 | 35657.9 |
| 3-dehydroquinate dehydratase | AO062_10770 | Not Available | Positive | 2325794 - 2326255 | 16442.9 |
| c4-dicarboxylate abc transporter permease | AO062_10775 | Not Available | Positive | 2326252 - 2326818 | 20348.5 |
| l-dehydroascorbate transporter large permease subunit | AO062_10780 | Not Available | Positive | 2326815 - 2328095 | 44684.3 |
| hyalin | AO062_10785 | Not Available | Positive | 2328100 - 2329515 | 49525.4 |
| prolyl aminopeptidase | AO062_10790 | Not Available | Negative | 2329496 - 2330428 | 33404.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
