Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO062_10640 | Not Available | Negative | 2303579 - 2304481 | 32520.7 |
| adenosine deaminase | AO062_10645 | Not Available | Positive | 2304504 - 2305679 | 43818.3 |
| abc transporter substrate-binding protein | AO062_10650 | Not Available | Positive | 2305688 - 2306668 | 34032.5 |
| hypothetical protein | AO062_10655 | Not Available | Negative | 2306813 - 2307271 | 16968.6 |
| o-acetylhomoserine aminocarboxypropyltransferase | AO062_10660 | Not Available | Positive | 2307420 - 2308730 | 46388.2 |
| alpha/beta hydrolase | AO062_10665 | Not Available | Positive | 2308732 - 2309538 | 28476.2 |
| epimerase | AO062_10670 | Not Available | Negative | 2309564 - 2310229 | 24271.8 |
| thioredoxin | AO062_10675 | Not Available | Negative | 2310251 - 2310634 | 13708.5 |
| hypothetical protein | AO062_10680 | Not Available | Positive | 2310733 - 2311083 | 13155.9 |
| hypothetical protein | AO062_10685 | Not Available | Negative | 2311106 - 2312317 | 44459.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
