Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dehydratase | AO062_10340 | Not Available | Positive | 2246154 - 2246978 | 29927.3 |
| gluconolactonase | AO062_10345 | Not Available | Positive | 2246993 - 2247883 | 31610.4 |
| c4-dicarboxylate abc transporter | AO062_10350 | Not Available | Positive | 2247930 - 2248907 | 36002.6 |
| c4-dicarboxylate abc transporter permease | AO062_10355 | Not Available | Positive | 2249005 - 2249493 | 18024.6 |
| hypothetical protein | AO062_10360 | Not Available | Positive | 2249502 - 2250797 | 45196.1 |
| galactarate dehydrogenase | AO062_10365 | Not Available | Positive | 2250820 - 2252391 | 55933.4 |
| oxidoreductase | AO062_10370 | Not Available | Positive | 2252418 - 2253179 | 26550.9 |
| abc transporter substrate-binding protein | AO062_10375 | Not Available | Positive | 2253228 - 2254208 | 34487.8 |
| mfs transporter | AO062_10380 | Not Available | Positive | 2254235 - 2255227 | 33982.1 |
| phosphatidylserine decarboxylase | AO062_10385 | Not Available | Positive | 2255480 - 2256325 | 30868.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
