Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucokinase | AO062_10290 | Not Available | Negative | 2234541 - 2235563 | 37685.6 |
| amino acid abc transporter permease | AO062_10295 | Not Available | Positive | 2235759 - 2237252 | 52381.6 |
| aldehyde dehydrogenase | AO062_10300 | Not Available | Negative | 2237572 - 2239008 | 50551.5 |
| gluconolactonase | AO062_10305 | Not Available | Negative | 2239064 - 2240161 | 40156.4 |
| glucarate dehydratase | AO062_10310 | Not Available | Negative | 2240211 - 2241572 | 49373.1 |
| laci family transcriptional regulator | AO062_10315 | Not Available | Negative | 2241589 - 2242575 | 34849.9 |
| hypothetical protein | AO062_10320 | Not Available | Negative | 2242590 - 2243048 | 15630.8 |
| 5-dehydro-4-deoxyglucarate dehydratase | AO062_10325 | Not Available | Negative | 2243101 - 2244012 | 32427.1 |
| abc transporter substrate-binding protein | AO062_10330 | Not Available | Negative | 2244071 - 2245060 | 34657.1 |
| gntr family transcriptional regulator | AO062_10335 | Not Available | Negative | 2245184 - 2246044 | 30706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
