Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO062_10240 | Not Available | Negative | 2222422 - 2223408 | 34942.9 |
| abc transporter permease | AO062_10245 | Not Available | Negative | 2223410 - 2224282 | 30954.3 |
| abc transporter substrate-binding protein | AO062_10250 | Not Available | Negative | 2224603 - 2225787 | 42136.0 |
| diguanylate cyclase | AO062_10255 | Not Available | Negative | 2225943 - 2226932 | 35341.4 |
| gntr family transcriptional regulator | AO062_10260 | Not Available | Negative | 2226978 - 2227751 | 27758.5 |
| rieske (2fe-2s) protein | AO062_10265 | Not Available | Negative | 2227751 - 2228860 | 41583.1 |
| methionine synthase | AO062_10270 | Not Available | Positive | 2229006 - 2230127 | 41899.9 |
| glutathione s-transferase | AO062_10275 | Not Available | Positive | 2230155 - 2230823 | 24765.9 |
| phospholipase | AO062_10280 | Not Available | Positive | 2230849 - 2232228 | 50799.4 |
| hypothetical protein | AO062_10285 | Not Available | Positive | 2232767 - 2234530 | 61828.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
