Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-3-methylglutaryl-coa lyase | AO062_10190 | Not Available | Negative | 2211098 - 2212045 | 33287.2 |
| lysr family transcriptional regulator | AO062_10195 | Not Available | Positive | 2212150 - 2213067 | 33194.1 |
| mbl fold metallo-hydrolase | AO062_10200 | Not Available | Positive | 2213187 - 2214086 | 31934.6 |
| protein-disulfide isomerase | AO062_10205 | Not Available | Positive | 2214074 - 2214799 | 25215.8 |
| iron dicitrate transport regulator fecr | AO062_10210 | Not Available | Positive | 2214930 - 2216267 | 48526.5 |
| tonb-dependent receptor | AO062_10215 | Not Available | Positive | 2216421 - 2218793 | 86060.4 |
| antibiotic biosynthesis monooxygenase | AO062_10220 | Not Available | Negative | 2218803 - 2219102 | 11142.3 |
| feruloyl esterase | AO062_10225 | Not Available | Negative | 2219221 - 2220924 | 59870.0 |
| abc transporter atp-binding protein | AO062_10230 | Not Available | Negative | 2220964 - 2221671 | 25331.8 |
| hemolysin iii | AO062_10235 | Not Available | Negative | 2221664 - 2222425 | 27497.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
