Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | AO062_00990 | Not Available | Positive | 210023 - 210436 | 14262.0 |
| amino acid abc transporter permease | AO062_00995 | Not Available | Negative | 210391 - 211449 | 38494.9 |
| amino acid abc transporter permease | AO062_01000 | Not Available | Negative | 211446 - 212447 | 35439.7 |
| amino acid abc transporter substrate-binding protein | AO062_01005 | Not Available | Negative | 212444 - 213493 | 37737.1 |
| gntr family transcriptional regulator | AO062_01010 | Not Available | Positive | 213670 - 214059 | 13324.0 |
| peptide deformylase | AO062_01015 | Not Available | Negative | 214080 - 214619 | 19937.8 |
| aromatic ring-opening dioxygenase liga | AO062_01025 | Not Available | Negative | 215208 - 217304 | 76176.9 |
| cell division protein ftsz | AO062_01030 | Not Available | Negative | 217331 - 218437 | 38873.0 |
| chromosome segregation protein smc | AO062_01035 | Not Available | Negative | 218451 - 221966 | 130175.0 |
| hypothetical protein | AO062_01040 | Not Available | Positive | 222080 - 222850 | 28224.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
