Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | AO062_10040 | Not Available | Negative | 2176789 - 2177355 | 21149.6 |
| excinuclease abc subunit c | AO062_10045 | Not Available | Negative | 2177413 - 2179386 | 72307.8 |
| gamma-glutamyltransferase | AO062_10050 | Not Available | Positive | 2179537 - 2181621 | 71440.6 |
| peptidase m20 | AO062_10055 | Not Available | Negative | 2181683 - 2183131 | 52478.1 |
| hypothetical protein | AO062_10060 | Not Available | Positive | 2183236 - 2184336 | 40327.1 |
| elongation factor p | AO062_10065 | Not Available | Positive | 2184490 - 2185044 | 20662.8 |
| 3-isopropylmalate dehydrogenase | AO062_10070 | Not Available | Positive | 2185167 - 2186030 | 32251.6 |
| transcriptional regulator | AO062_10075 | Not Available | Negative | 2186149 - 2186799 | 23780.2 |
| hypothetical protein | AO062_10080 | Not Available | Negative | 2186802 - 2187260 | 16714.0 |
| disulfide bond formation protein dsba | AO062_10085 | Not Available | Negative | 2187343 - 2188881 | 52862.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
