Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | AO062_09780 | Not Available | Positive | 2130859 - 2131308 | 16776.4 |
| 6-o-methylguanine dna methyltransferase | AO062_09785 | Not Available | Positive | 2131305 - 2131784 | 17210.7 |
| dna-binding transcriptional regulator | AO062_09790 | Not Available | Positive | 2131784 - 2132533 | 27841.4 |
| replicative dna helicase | AO062_09795 | Not Available | Negative | 2132554 - 2133960 | 51450.5 |
| 50s ribosomal protein l9 | AO062_09800 | Not Available | Negative | 2134133 - 2134585 | 15863.1 |
| 30s ribosomal protein s18 | AO062_09805 | Not Available | Negative | 2134601 - 2134882 | 11040.5 |
| single-stranded dna-binding protein | AO062_09810 | Not Available | Negative | 2134904 - 2135218 | 10981.2 |
| 30s ribosomal protein s6 | AO062_09815 | Not Available | Negative | 2135223 - 2135597 | 14217.1 |
| hypothetical protein | AO062_09820 | Not Available | Negative | 2135714 - 2136172 | 15922.2 |
| phosphoenolpyruvate synthase | AO062_09825 | Not Available | Negative | 2136333 - 2138718 | 86284.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
