Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | AO062_09430 | Not Available | Positive | 2060588 - 2061997 | 49945.6 |
| abc transporter substrate-binding protein | AO062_09435 | Not Available | Positive | 2062047 - 2063051 | 34881.2 |
| gntr family transcriptional regulator | AO062_09440 | Not Available | Positive | 2063191 - 2063664 | 15994.0 |
| cyclic nucleotide-binding protein | AO062_09445 | Not Available | Negative | 2063675 - 2064388 | 25790.2 |
| guanylate cyclase | AO062_09450 | Not Available | Positive | 2064444 - 2066102 | 60229.4 |
| alpha/beta hydrolase | AO062_09455 | Not Available | Positive | 2066220 - 2066579 | 12432.5 |
| rna 3'-terminal-phosphate cyclase | AO062_09460 | Not Available | Negative | 2066580 - 2067680 | 38650.7 |
| hypothetical protein | AO062_09465 | Not Available | Negative | 2067703 - 2068056 | 13194.7 |
| hypothetical protein | AO062_09470 | Not Available | Negative | 2068117 - 2068410 | 10241.3 |
| rna ligase | AO062_09475 | Not Available | Negative | 2068407 - 2069627 | 44382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
