Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | AO062_09380 | Not Available | Positive | 2052237 - 2053976 | 62745.1 |
| marr family transcriptional regulator | AO062_09385 | Not Available | Positive | 2054013 - 2054504 | 17848.7 |
| tetr family transcriptional regulator | AO062_09390 | Not Available | Negative | 2054529 - 2055182 | 22916.5 |
| 3-demethylubiquinone-9 3-methyltransferase | AO062_09395 | Not Available | Positive | 2055304 - 2055747 | 15590.7 |
| polyketide cyclase | AO062_09400 | Not Available | Positive | 2055794 - 2056321 | 19147.1 |
| 3-demethylubiquinone-9 3-methyltransferase | AO062_09405 | Not Available | Positive | 2056369 - 2056788 | 15167.4 |
| disulfide bond formation protein dsba | AO062_09410 | Not Available | Positive | 2056841 - 2058316 | 50256.9 |
| rna signal recognition particle 4.5s rna | AO062_09415 | Not Available | Positive | 2058387 - 2058749 | 13742.9 |
| permease | AO062_09420 | Not Available | Negative | 2058757 - 2059515 | 27221.6 |
| gntr family transcriptional regulator | AO062_09425 | Not Available | Positive | 2059691 - 2060473 | 28914.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
