Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase | AO062_09330 | Not Available | Positive | 2041131 - 2041856 | 26530.2 |
| potassium transporter | AO062_09335 | Not Available | Positive | 2041859 - 2043721 | 66970.6 |
| succinylglutamate desuccinylase | AO062_09340 | Not Available | Negative | 2043731 - 2044681 | 34266.0 |
| abc transporter substrate-binding protein | AO062_09345 | Not Available | Negative | 2044698 - 2045699 | 34826.5 |
| rpir family transcriptional regulator | AO062_09350 | Not Available | Positive | 2045822 - 2046718 | 31928.3 |
| amidohydrolase | AO062_09355 | Not Available | Negative | 2046722 - 2047597 | 32903.3 |
| enoyl-coa hydratase | AO062_09360 | Not Available | Positive | 2047702 - 2048475 | 27557.1 |
| feruloyl-coa synthase | AO062_09365 | Not Available | Positive | 2048567 - 2050420 | 66663.8 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | AO062_09370 | Not Available | Positive | 2050440 - 2051204 | 26164.0 |
| twin-arginine translocation pathway signal protein | AO062_09375 | Not Available | Positive | 2051239 - 2052231 | 33987.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
