Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase assembly protein | AO062_09280 | Not Available | Negative | 2032916 - 2033545 | 23108.9 |
| cytochrome oxidase subunit i | AO062_09285 | Not Available | Negative | 2033738 - 2035375 | 60681.1 |
| cytochrome c oxidase subunit ii | AO062_09290 | Not Available | Negative | 2035419 - 2036597 | 42750.9 |
| hypothetical protein | AO062_09295 | Not Available | Negative | 2036657 - 2037133 | 17644.5 |
| biotin synthase | AO062_09300 | Not Available | Negative | 2037297 - 2038211 | 34109.8 |
| phosphoribosyltransferase | AO062_09305 | Not Available | Positive | 2038234 - 2038950 | 25680.3 |
| rrna methylase | AO062_09310 | Not Available | Positive | 2038982 - 2039443 | 17036.5 |
| hypothetical protein | AO062_09315 | Not Available | Positive | 2039560 - 2039850 | 9881.76 |
| dehydratase | AO062_09320 | Not Available | Negative | 2039876 - 2040346 | 17311.0 |
| cobyrinic acid a,c-diamide synthase | AO062_09325 | Not Available | Negative | 2040418 - 2041038 | 22637.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
