Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-32 | AO062_09230 | Not Available | Positive | 2025203 - 2026144 | 34505.3 |
| dna alkylation repair protein | AO062_09235 | Not Available | Negative | 2026212 - 2027042 | 30653.7 |
| photosynthetic protein synthase i | AO062_09240 | Not Available | Negative | 2027059 - 2027685 | 22273.8 |
| protoheme ix farnesyltransferase | AO062_09245 | Not Available | Negative | 2027697 - 2028602 | 33098.4 |
| cytochrome c oxidase subunit i | AO062_09250 | Not Available | Negative | 2028599 - 2029822 | 43860.0 |
| hypothetical protein | AO062_09255 | Not Available | Negative | 2029841 - 2030524 | 25240.4 |
| transmembrane cytochrome oxidase | AO062_09260 | Not Available | Negative | 2030508 - 2031392 | 31788.2 |
| hypothetical protein | AO062_09265 | Not Available | Positive | 2031420 - 2031650 | 8569.06 |
| mfs transporter | AO062_09270 | Not Available | Negative | 2031731 - 2032612 | 33087.3 |
| hypothetical protein | AO062_09275 | Not Available | Negative | 2032695 - 2032919 | 8125.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
