Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | AO062_09080 | Not Available | Negative | 1995074 - 1995379 | 10950.9 |
| abc transporter permease | AO062_09085 | Not Available | Positive | 1995525 - 1996475 | 34075.1 |
| peptide abc transporter permease | AO062_09090 | Not Available | Positive | 1996472 - 1997347 | 30755.5 |
| abc transporter | AO062_09095 | Not Available | Positive | 1997359 - 1998348 | 34989.9 |
| peptide abc transporter atp-binding protein | AO062_09100 | Not Available | Positive | 1998345 - 1999166 | 29646.8 |
| abc transporter substrate-binding protein | AO062_09105 | Not Available | Positive | 1999442 - 2000929 | 53537.2 |
| amidase | AO062_09110 | Not Available | Positive | 2000926 - 2002347 | 50674.6 |
| lysr family transcriptional regulator | AO062_09115 | Not Available | Negative | 2002360 - 2003223 | 30661.3 |
| 4-oxalocrotonate tautomerase | AO062_09120 | Not Available | Positive | 2003348 - 2003746 | 14381.1 |
| hypothetical protein | AO062_09125 | Not Available | Positive | 2003790 - 2005151 | 48989.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
