Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific adenine glycosylase | AO062_09025 | Not Available | Negative | 1984501 - 1985541 | 38284.1 |
| dynamin family protein | AO062_09030 | Not Available | Negative | 1985576 - 1987549 | 73178.9 |
| formamidopyrimidine-dna glycosylase | AO062_09035 | Not Available | Negative | 1987653 - 1988468 | 29898.5 |
| hypothetical protein | AO062_09040 | Not Available | Positive | 1988540 - 1990393 | 67558.6 |
| hypothetical protein | AO062_09045 | Not Available | Positive | 1990394 - 1990939 | 18780.2 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | AO062_09050 | Not Available | Positive | 1990936 - 1991817 | 31563.9 |
| ribose-phosphate pyrophosphokinase | AO062_09060 | Not Available | Positive | 1992109 - 1993083 | 35104.4 |
| 50s ribosomal protein l25 | AO062_09065 | Not Available | Positive | 1993170 - 1993826 | 23805.8 |
| peptidyl-trna hydrolase | AO062_09070 | Not Available | Positive | 1993908 - 1994543 | 23088.9 |
| hypothetical protein | AO062_09075 | Not Available | Positive | 1994744 - 1995091 | 12611.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
