Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | AO062_08960 | Not Available | Positive | 1970711 - 1972954 | 82615.0 |
| transcription elongation factor greb | AO062_08965 | Not Available | Negative | 1972964 - 1973545 | 21259.8 |
| hypothetical protein | AO062_08970 | Not Available | Positive | 1973785 - 1974186 | 14725.5 |
| dna-binding protein | AO062_08980 | Not Available | Positive | 1974549 - 1974959 | 13929.3 |
| multidrug transporter | AO062_08990 | Not Available | Negative | 1975303 - 1978437 | 110942.0 |
| acriflavine resistance protein e | AO062_08995 | Not Available | Negative | 1978457 - 1979605 | 40461.6 |
| hrca family transcriptional regulator | AO062_09005 | Not Available | Negative | 1979948 - 1980955 | 36859.4 |
| inorganic polyphosphate kinase | AO062_09010 | Not Available | Positive | 1980987 - 1981892 | 32625.2 |
| dna repair protein recn | AO062_09015 | Not Available | Positive | 1981930 - 1983612 | 59734.6 |
| nucleotide-binding protein | AO062_09020 | Not Available | Positive | 1983615 - 1984487 | 32598.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
