Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | AO062_08755 | Not Available | Negative | 1924880 - 1925665 | 29326.2 |
| hypothetical protein | AO062_08760 | Not Available | Negative | 1926196 - 1927149 | 35283.4 |
| alpha/beta hydrolase | AO062_08765 | Not Available | Positive | 1927535 - 1928449 | 32152.9 |
| haloacid dehalogenase | AO062_08770 | Not Available | Negative | 1928480 - 1929175 | 25134.4 |
| dihydroxyacetone kinase | AO062_08775 | Not Available | Negative | 1929210 - 1930976 | 60291.6 |
| fad-dependent oxidoreductase | AO062_08780 | Not Available | Negative | 1931043 - 1932794 | 61834.3 |
| carbohydrate kinase | AO062_08785 | Not Available | Negative | 1932791 - 1934395 | 55961.1 |
| ribose 5-phosphate isomerase | AO062_08790 | Not Available | Negative | 1934433 - 1934900 | 16429.5 |
| sugar abc transporter substrate-binding protein | AO062_08795 | Not Available | Negative | 1935001 - 1935960 | 33117.6 |
| sugar abc transporter permease | AO062_08800 | Not Available | Negative | 1936023 - 1937093 | 36096.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
