Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein | AO062_00840 | Not Available | Negative | 172399 - 172878 | 16362.6 |
| acetyl-coa acetyltransferase | AO062_00845 | Not Available | Negative | 172881 - 174056 | 40769.3 |
| hypothetical protein | AO062_00850 | Not Available | Negative | 174106 - 175584 | 52531.6 |
| 3-hydroxyacyl-coa dehydrogenase | AO062_00855 | Not Available | Negative | 175610 - 177712 | 75551.9 |
| mannosyltransferase | AO062_00860 | Not Available | Negative | 177950 - 178645 | 25616.2 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_00865 | Not Available | Negative | 178647 - 179423 | 27870.8 |
| abc transporter permease | AO062_00870 | Not Available | Negative | 179424 - 180749 | 47716.7 |
| abc transporter permease | AO062_00875 | Not Available | Negative | 180754 - 181707 | 34014.9 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_00880 | Not Available | Negative | 181791 - 183032 | 45239.0 |
| branched-chain amino acid abc transporter substrate-binding protein | AO062_00885 | Not Available | Negative | 183234 - 184463 | 44782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
