Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | AO062_08450 | Not Available | Negative | 1857980 - 1858741 | 28059.1 |
| ornithine carbamoyltransferase | AO062_08455 | Not Available | Positive | 1858953 - 1859450 | 17156.7 |
| hypothetical protein | AO062_08460 | Not Available | Negative | 1859463 - 1860164 | 23719.6 |
| coproporphyrinogen iii oxidase | AO062_08465 | Not Available | Negative | 1860171 - 1861577 | 51748.2 |
| hypothetical protein | AO062_08470 | Not Available | Negative | 1861574 - 1861816 | 8712.81 |
| nitrogen fixation protein fixh | AO062_08475 | Not Available | Negative | 1861813 - 1862103 | 10562.7 |
| cytochrome c oxidase | AO062_08480 | Not Available | Negative | 1862115 - 1863542 | 53724.7 |
| cytochrome oxidase subunit iii | AO062_08485 | Not Available | Negative | 1863539 - 1864453 | 32646.9 |
| cytochrome oxidase | AO062_08490 | Not Available | Negative | 1864467 - 1864607 | 5175.3 |
| cytochrome c oxidase cbb3 | AO062_08495 | Not Available | Negative | 1864631 - 1865275 | 23727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
