Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | AO062_08240 | Not Available | Positive | 1815428 - 1815943 | 18910.0 |
| laci family transcriptional regulator | AO062_08245 | Not Available | Positive | 1816107 - 1817126 | 35664.7 |
| abc transporter substrate-binding protein | AO062_08250 | Not Available | Positive | 1817155 - 1818168 | 36357.6 |
| abc transporter permease | AO062_08255 | Not Available | Positive | 1818185 - 1819024 | 29841.8 |
| abc transporter permease | AO062_08260 | Not Available | Positive | 1819024 - 1819824 | 28890.2 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | AO062_08265 | Not Available | Positive | 1819814 - 1820887 | 38703.8 |
| metallophosphatase | AO062_08270 | Not Available | Positive | 1820884 - 1821741 | 31096.1 |
| hypothetical protein | AO062_08275 | Not Available | Positive | 1821815 - 1823476 | 59742.8 |
| hypothetical protein | AO062_08280 | Not Available | Positive | 1823825 - 1824481 | 24384.8 |
| hypothetical protein | AO062_08285 | Not Available | Positive | 1824557 - 1826962 | 87941.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
