Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dehydratase | AO062_08090 | Not Available | Negative | 1782134 - 1783069 | 34287.2 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | AO062_08095 | Not Available | Positive | 1783144 - 1784208 | 38675.5 |
| abc transporter substrate-binding protein | AO062_08100 | Not Available | Positive | 1784246 - 1785223 | 33886.9 |
| crp/fnr family transcriptional regulator | AO062_08105 | Not Available | Negative | 1785195 - 1785971 | 28193.9 |
| isoquinoline 1-oxidoreductase | AO062_08110 | Not Available | Positive | 1786127 - 1788322 | 77149.2 |
| (2fe-2s)-binding protein | AO062_08115 | Not Available | Positive | 1788334 - 1788792 | 16348.8 |
| abc transporter atp-binding protein | AO062_08120 | Not Available | Negative | 1788857 - 1789612 | 26764.8 |
| abc transporter | AO062_08125 | Not Available | Negative | 1789635 - 1790408 | 28150.2 |
| abc transporter atp-binding protein | AO062_08130 | Not Available | Negative | 1790426 - 1791634 | 42757.6 |
| abc transporter permease | AO062_08135 | Not Available | Negative | 1791648 - 1792577 | 32498.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
