Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | AO062_07985 | Not Available | Positive | 1761176 - 1762336 | 42975.6 |
| 2-methylcitrate dehydratase | AO062_07990 | Not Available | Positive | 1762347 - 1763708 | 47945.0 |
| arylmalonate decarboxylase | AO062_07995 | Not Available | Negative | 1763719 - 1764429 | 24993.2 |
| abc transporter substrate-binding protein | AO062_08000 | Not Available | Negative | 1764431 - 1765438 | 34735.4 |
| mandelate racemase | AO062_08005 | Not Available | Negative | 1765515 - 1766669 | 41905.6 |
| lysr family transcriptional regulator | AO062_08010 | Not Available | Negative | 1766785 - 1767672 | 32032.5 |
| lysr family transcriptional regulator | AO062_08015 | Not Available | Negative | 1767686 - 1768576 | 32337.1 |
| 3-hydroxyacyl-coa dehydrogenase | AO062_08020 | Not Available | Negative | 1768704 - 1769609 | 31688.8 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | AO062_08025 | Not Available | Negative | 1769752 - 1770633 | 32940.7 |
| alpha/beta hydrolase | AO062_08030 | Not Available | Negative | 1770630 - 1771529 | 31900.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
