Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | AO062_07630 | Not Available | Positive | 1685693 - 1686217 | 19099.9 |
| hydratase | AO062_07640 | Not Available | Negative | 1687441 - 1688370 | 33196.7 |
| transcriptional regulator | AO062_07645 | Not Available | Positive | 1688489 - 1688947 | 16869.4 |
| porin | AO062_07650 | Not Available | Negative | 1688961 - 1690286 | 48097.7 |
| hypothetical protein | AO062_07655 | Not Available | Negative | 1690297 - 1691478 | 43355.1 |
| permease | AO062_07660 | Not Available | Negative | 1691555 - 1692832 | 45492.2 |
| lyttr family transcriptional regulator | AO062_07665 | Not Available | Negative | 1692829 - 1693581 | 27946.4 |
| histidine kinase | AO062_07670 | Not Available | Negative | 1693578 - 1694651 | 38261.9 |
| argininosuccinate lyase | AO062_07675 | Not Available | Positive | 1694709 - 1696106 | 51408.9 |
| protease | AO062_07680 | Not Available | Positive | 1696140 - 1697618 | 55595.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
