Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme biosynthesis protein hemy | AO062_07580 | Not Available | Negative | 1667046 - 1668332 | 47164.1 |
| uroporphyrin-iii methyltransferase | AO062_07585 | Not Available | Negative | 1668340 - 1669434 | 39144.1 |
| uroporphyrinogen iii synthase | AO062_07590 | Not Available | Negative | 1669431 - 1670201 | 26895.1 |
| porphobilinogen deaminase | AO062_07595 | Not Available | Negative | 1670221 - 1671138 | 32686.2 |
| phosphoenolpyruvate carboxylase | AO062_07600 | Not Available | Positive | 1671233 - 1674079 | 105093.0 |
| hypothetical protein | AO062_07605 | Not Available | Positive | 1674246 - 1674464 | 7826.59 |
| cation tolerance protein cuta | AO062_07610 | Not Available | Positive | 1674461 - 1682671 | 300384.0 |
| hypothetical protein | AO062_07615 | Not Available | Positive | 1682707 - 1683249 | 19541.0 |
| transporter | AO062_07620 | Not Available | Positive | 1683461 - 1684711 | 42142.0 |
| lysr family transcriptional regulator | AO062_07625 | Not Available | Negative | 1684718 - 1685644 | 33090.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
