Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_07380 | Not Available | Positive | 1625297 - 1626667 | 50200.4 |
| lysyl-trna synthetase | AO062_07385 | Not Available | Positive | 1626813 - 1628354 | 57880.0 |
| hypothetical protein | AO062_07390 | Not Available | Positive | 1628378 - 1629172 | 30274.9 |
| galactosyl transferase gma12/mnn10 family protein | AO062_07395 | Not Available | Negative | 1629187 - 1630521 | 49832.8 |
| heat-shock protein | AO062_07400 | Not Available | Positive | 1630616 - 1631881 | 45768.7 |
| metal-dependent hydrolase | AO062_07405 | Not Available | Positive | 1631889 - 1632416 | 19878.2 |
| family 2 glycosyl transferase | AO062_07410 | Not Available | Positive | 1632436 - 1634334 | 70859.2 |
| beta-hexosaminidase | AO062_07415 | Not Available | Negative | 1634304 - 1635401 | 39655.5 |
| acp synthase | AO062_07420 | Not Available | Negative | 1635446 - 1635838 | 14670.8 |
| pyridoxine 5'-phosphate synthase | AO062_07425 | Not Available | Negative | 1635835 - 1636608 | 27578.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
