Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase | AO062_07280 | Not Available | Positive | 1604599 - 1605045 | 16625.6 |
| succinate dehydrogenase | AO062_07285 | Not Available | Positive | 1605059 - 1605424 | 13786.4 |
| fumarate reductase | AO062_07290 | Not Available | Positive | 1605431 - 1607239 | 65814.4 |
| succinate dehydrogenase | AO062_07295 | Not Available | Positive | 1607262 - 1607963 | 26624.3 |
| hypothetical protein | AO062_07300 | Not Available | Positive | 1607988 - 1608308 | 11812.3 |
| type ii citrate synthase | AO062_07305 | Not Available | Positive | 1608333 - 1609643 | 48604.7 |
| lysr family transcriptional regulator | AO062_07310 | Not Available | Positive | 1609824 - 1610777 | 34128.9 |
| isopropylmalate isomerase | AO062_07315 | Not Available | Positive | 1610826 - 1612247 | 50758.7 |
| 3-isopropylmalate dehydratase | AO062_07320 | Not Available | Positive | 1612264 - 1612914 | 24418.3 |
| 3-isopropylmalate dehydrogenase | AO062_07325 | Not Available | Positive | 1612958 - 1614046 | 39156.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
