Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO062_07165 | Not Available | Negative | 1575312 - 1576220 | 33436.2 |
| nadph:quinone reductase | AO062_07170 | Not Available | Positive | 1576310 - 1577320 | 35580.1 |
| gcn5 family acetyltransferase | AO062_07175 | Not Available | Positive | 1577340 - 1577933 | 21757.9 |
| permease | AO062_07180 | Not Available | Negative | 1577925 - 1578638 | 24505.9 |
| s-adenosylhomocysteine deaminase | AO062_07185 | Not Available | Negative | 1578635 - 1580047 | 50248.0 |
| nucleobase:cation symporter | AO062_07190 | Not Available | Negative | 1580093 - 1581406 | 45330.3 |
| laci family transcriptional regulator | AO062_07195 | Not Available | Positive | 1581617 - 1582657 | 36546.9 |
| sorbosone dehydrogenase | AO062_07200 | Not Available | Negative | 1582665 - 1584023 | 47237.3 |
| ala-trna(pro) hydrolase | AO062_07205 | Not Available | Positive | 1584154 - 1584927 | 27243.6 |
| protein-disulfide reductase | AO062_07210 | Not Available | Positive | 1585046 - 1587217 | 75021.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
