Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine methyltransferase | AO062_00690 | Not Available | Negative | 140063 - 140620 | 19399.2 |
| hypothetical protein | AO062_00695 | Not Available | Positive | 140993 - 141475 | 17017.0 |
| pilus assembly protein pilv | AO062_00700 | Not Available | Positive | 141472 - 142071 | 20895.0 |
| hypothetical protein | AO062_00705 | Not Available | Positive | 142068 - 143072 | 35401.3 |
| hypothetical protein | AO062_00710 | Not Available | Positive | 143132 - 143677 | 19601.5 |
| fimbrial protein | AO062_00715 | Not Available | Positive | 143697 - 144185 | 17648.1 |
| pilus assembly protein pily | AO062_00720 | Not Available | Positive | 144418 - 148038 | 130056.0 |
| lactate dehydrogenase | AO062_00725 | Not Available | Negative | 148066 - 151122 | 109729.0 |
| gntr family transcriptional regulator | AO062_00730 | Not Available | Negative | 151132 - 151845 | 26487.1 |
| serine--glyoxylate aminotransferase | AO062_00735 | Not Available | Positive | 151967 - 153211 | 44587.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
