Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO062_06815 | Not Available | Positive | 1501930 - 1502817 | 32246.1 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | AO062_06820 | Not Available | Negative | 1502807 - 1503655 | 30578.4 |
| 3-oxoacyl-acp reductase | AO062_06825 | Not Available | Negative | 1503691 - 1504446 | 26235.4 |
| oxidoreductase | AO062_06830 | Not Available | Negative | 1504443 - 1505177 | 25319.6 |
| gntr family transcriptional regulator | AO062_06835 | Not Available | Positive | 1505343 - 1506050 | 25943.0 |
| abc transporter substrate-binding protein | AO062_06840 | Not Available | Positive | 1506098 - 1507108 | 36787.9 |
| abc transporter permease | AO062_06845 | Not Available | Positive | 1507118 - 1507675 | 20514.1 |
| abc transporter permease | AO062_06850 | Not Available | Positive | 1507707 - 1509101 | 49861.5 |
| galactonate dehydratase | AO062_06855 | Not Available | Positive | 1509149 - 1510675 | 53799.9 |
| dehydrogenase | AO062_06860 | Not Available | Positive | 1510732 - 1511790 | 36599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
