Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsba | AO062_06765 | Not Available | Negative | 1490859 - 1491452 | 21401.8 |
| glucose 1-dehydrogenase | AO062_06770 | Not Available | Negative | 1491500 - 1492246 | 27006.4 |
| acyl-coa thioesterase | AO062_06775 | Not Available | Negative | 1492251 - 1493090 | 30188.6 |
| alpha/beta hydrolase | AO062_06780 | Not Available | Negative | 1493123 - 1494028 | 33226.8 |
| acetyl-coa acetyltransferase | AO062_06785 | Not Available | Negative | 1494186 - 1495385 | 41604.3 |
| 3-hydroxyacyl-coa dehydrogenase | AO062_06790 | Not Available | Negative | 1495397 - 1497820 | 86199.1 |
| hypothetical protein | AO062_06795 | Not Available | Negative | 1497860 - 1498294 | 15720.8 |
| acyl-coa dehydrogenase | AO062_06800 | Not Available | Negative | 1498338 - 1500134 | 64938.3 |
| tetr family transcriptional regulator | AO062_06805 | Not Available | Negative | 1500209 - 1500913 | 25112.1 |
| oxidoreductase | AO062_06810 | Not Available | Negative | 1501063 - 1501821 | 26267.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
