Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_06655 | Not Available | Negative | 1469730 - 1469966 | 8733.95 |
| gntr family transcriptional regulator | AO062_06660 | Not Available | Positive | 1470349 - 1471815 | 53772.5 |
| transcription elongation factor greab | AO062_06665 | Not Available | Negative | 1471895 - 1472377 | 17737.3 |
| hypothetical protein | AO062_06670 | Not Available | Negative | 1472525 - 1472962 | 16369.4 |
| hypothetical protein | AO062_06675 | Not Available | Negative | 1472990 - 1473361 | 14216.6 |
| c4-dicarboxylate abc transporter | AO062_06680 | Not Available | Positive | 1475391 - 1475975 | 21493.2 |
| c4-dicarboxylate abc transporter | AO062_06685 | Not Available | Positive | 1475972 - 1476897 | 31767.3 |
| c4-dicarboxylate abc transporter | AO062_06700 | Not Available | Positive | 1477240 - 1478277 | 37353.6 |
| nucleoside hydrolase | AO062_06705 | Not Available | Positive | 1478323 - 1479261 | 33294.1 |
| amino acid abc transporter atp-binding protein | AO062_06710 | Not Available | Negative | 1479334 - 1480071 | 27131.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
