Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_00640 | Not Available | Negative | 129560 - 130189 | 21749.9 |
| mammalian cell entry protein | AO062_00645 | Not Available | Negative | 130186 - 131847 | 60465.5 |
| paraquat-inducible protein a | AO062_00650 | Not Available | Negative | 131844 - 132581 | 27132.2 |
| paraquat-inducible protein a | AO062_00655 | Not Available | Negative | 132584 - 133240 | 23602.4 |
| multidrug mfs transporter | AO062_00660 | Not Available | Negative | 133261 - 134691 | 48687.5 |
| mfs transporter | AO062_00665 | Not Available | Negative | 134693 - 135886 | 41165.5 |
| pyridoxamine 5'-phosphate oxidase | AO062_00670 | Not Available | Negative | 136010 - 136621 | 21842.3 |
| mfs transporter | AO062_00675 | Not Available | Negative | 136618 - 137793 | 40779.8 |
| lysr family transcriptional regulator | AO062_00680 | Not Available | Positive | 137872 - 138753 | 32433.1 |
| mfs transporter | AO062_00685 | Not Available | Positive | 138832 - 140052 | 41205.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
