Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO062_06555 | Not Available | Negative | 1442083 - 1443000 | 34408.9 |
| 3-hydroxyacyl-coa dehydrogenase | AO062_06560 | Not Available | Positive | 1443156 - 1445291 | 75454.1 |
| acetyl-coa acetyltransferase | AO062_06565 | Not Available | Positive | 1445324 - 1446514 | 42023.5 |
| acyl-coa dehydrogenase | AO062_06570 | Not Available | Positive | 1446529 - 1447746 | 44473.1 |
| acyl-coa dehydrogenase | AO062_06575 | Not Available | Positive | 1447758 - 1448900 | 40263.0 |
| enoyl-coa hydratase | AO062_06580 | Not Available | Positive | 1448897 - 1449712 | 28434.1 |
| coa-transferase | AO062_06585 | Not Available | Positive | 1449786 - 1450994 | 43226.1 |
| abc transporter substrate-binding protein | AO062_06590 | Not Available | Positive | 1451039 - 1452037 | 35049.6 |
| amp-dependent synthetase | AO062_06595 | Not Available | Positive | 1452084 - 1454036 | 68156.7 |
| abc transporter substrate-binding protein | AO062_06600 | Not Available | Positive | 1454089 - 1455087 | 35337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
