Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_06400 | Not Available | Negative | 1412063 - 1412290 | 8064.95 |
| gntr family transcriptional regulator | AO062_06405 | Not Available | Positive | 1412458 - 1413225 | 27593.9 |
| hypothetical protein | AO062_06410 | Not Available | Positive | 1413293 - 1414240 | 32684.3 |
| hypothetical protein | AO062_06415 | Not Available | Positive | 1414291 - 1415121 | 29752.1 |
| abc transporter substrate-binding protein | AO062_06420 | Not Available | Negative | 1415122 - 1416093 | 34150.1 |
| mbl fold metallo-hydrolase | AO062_06425 | Not Available | Positive | 1416237 - 1417919 | 59817.0 |
| rna-binding protein | AO062_06430 | Not Available | Positive | 1417916 - 1418644 | 26543.1 |
| hypothetical protein | AO062_06435 | Not Available | Positive | 1418730 - 1419299 | 20131.4 |
| rnd transporter | AO062_06440 | Not Available | Negative | 1419330 - 1420811 | 51414.7 |
| secretion protein hlyd | AO062_06445 | Not Available | Negative | 1420808 - 1421731 | 32993.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
