Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | AO062_06290 | Not Available | Negative | 1389934 - 1390818 | 31640.7 |
| arylesterase | AO062_06295 | Not Available | Negative | 1390895 - 1391716 | 29716.4 |
| mfs transporter | AO062_06300 | Not Available | Negative | 1391774 - 1393357 | 56119.2 |
| doxx family protein | AO062_06305 | Not Available | Negative | 1393350 - 1393748 | 14440.9 |
| amidohydrolase | AO062_06310 | Not Available | Negative | 1393757 - 1395649 | 69185.3 |
| hypothetical protein | AO062_06315 | Not Available | Negative | 1395730 - 1396026 | 10311.8 |
| chloroperoxidase | AO062_06320 | Not Available | Negative | 1396056 - 1396709 | 23167.8 |
| lysr family transcriptional regulator | AO062_06325 | Not Available | Positive | 1396890 - 1397801 | 32781.8 |
| 2-hydroxychromene-2-carboxylate isomerase | AO062_06330 | Not Available | Negative | 1397820 - 1398449 | 23242.6 |
| alpha/beta hydrolase | AO062_06335 | Not Available | Positive | 1398581 - 1399459 | 31970.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
