Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_00590 | Not Available | Positive | 116464 - 117036 | 20872.6 |
| mate family efflux transporter | AO062_00595 | Not Available | Positive | 117033 - 118472 | 50031.1 |
| 3-demethylubiquinone-9 3-methyltransferase | AO062_00600 | Not Available | Negative | 118491 - 118967 | 17680.5 |
| 6-aminohexanoate hydrolase | AO062_00605 | Not Available | Positive | 119115 - 120449 | 48299.6 |
| ligand-gated channel protein | AO062_00610 | Not Available | Negative | 120451 - 122643 | 79729.5 |
| hypothetical protein | AO062_00615 | Not Available | Negative | 122969 - 123985 | 37207.2 |
| rna polymerase subunit sigma | AO062_00620 | Not Available | Negative | 124055 - 124564 | 18952.5 |
| hypothetical protein | AO062_00625 | Not Available | Negative | 124776 - 126212 | 50475.9 |
| hypothetical protein | AO062_00630 | Not Available | Negative | 126386 - 127870 | 54985.9 |
| mfs transporter | AO062_00635 | Not Available | Negative | 127890 - 129497 | 54852.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
