Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | AO062_06040 | Not Available | Negative | 1333217 - 1334566 | 49646.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | AO062_06045 | Not Available | Negative | 1334569 - 1335030 | 15561.7 |
| redoxin | AO062_06050 | Not Available | Negative | 1335132 - 1335692 | 20125.3 |
| hypothetical protein | AO062_06055 | Not Available | Negative | 1335692 - 1336288 | 22198.4 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | AO062_06060 | Not Available | Positive | 1336390 - 1337802 | 50216.0 |
| hypothetical protein | AO062_06065 | Not Available | Positive | 1337799 - 1338308 | 18560.1 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | AO062_06070 | Not Available | Negative | 1338320 - 1339438 | 40569.5 |
| hypothetical protein | AO062_06075 | Not Available | Negative | 1339674 - 1340213 | 18307.5 |
| protease tldd | AO062_06080 | Not Available | Negative | 1340295 - 1341755 | 51414.2 |
| rod shape-determining protein roda | AO062_06085 | Not Available | Negative | 1341804 - 1342958 | 41256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
