Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter substrate-binding protein | AO062_05890 | Not Available | Negative | 1296928 - 1297938 | 36171.3 |
| taurine dioxygenase | AO062_05895 | Not Available | Negative | 1297969 - 1298868 | 33822.2 |
| hypothetical protein | AO062_05900 | Not Available | Negative | 1299225 - 1300337 | 40028.8 |
| short-chain dehydrogenase | AO062_05905 | Not Available | Positive | 1300380 - 1301165 | 27871.2 |
| dihydroneopterin aldolase | AO062_05910 | Not Available | Positive | 1301180 - 1301557 | 14068.1 |
| trna 2-thiocytidine biosynthesis protein | AO062_05915 | Not Available | Positive | 1301609 - 1302538 | 34602.9 |
| hypothetical protein | AO062_05920 | Not Available | Positive | 1302586 - 1303209 | 22610.6 |
| phosphoglycerate mutase | AO062_05925 | Not Available | Positive | 1303232 - 1303882 | 23687.8 |
| hypothetical protein | AO062_05930 | Not Available | Positive | 1303928 - 1304620 | 24872.8 |
| acriflavine resistance protein b | AO062_05935 | Not Available | Negative | 1304885 - 1308046 | 112824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
