Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose phosphatase | AO062_05790 | Not Available | Negative | 1278693 - 1279484 | 27965.7 |
| phosphatase | AO062_05795 | Not Available | Negative | 1279558 - 1280829 | 46771.5 |
| hypothetical protein | AO062_05800 | Not Available | Positive | 1280995 - 1281732 | 25957.9 |
| glutathione s-transferase | AO062_05805 | Not Available | Negative | 1281749 - 1282435 | 25149.4 |
| methyltransferase | AO062_05810 | Not Available | Negative | 1282545 - 1283102 | 19419.9 |
| lytic transglycosylase | AO062_05815 | Not Available | Negative | 1283104 - 1285134 | 74321.2 |
| 5-formyltetrahydrofolate cyclo-ligase | AO062_05820 | Not Available | Positive | 1285144 - 1285761 | 23041.7 |
| lysr family transcriptional regulator | AO062_05825 | Not Available | Negative | 1285879 - 1286862 | 36513.7 |
| hypothetical protein | AO062_05830 | Not Available | Positive | 1287038 - 1287355 | 11080.2 |
| blue light sensor protein | AO062_05835 | Not Available | Negative | 1287449 - 1287865 | 14809.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
