Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO062_05590 | Not Available | Positive | 1231477 - 1231968 | 16615.1 |
| hypothetical protein | AO062_05595 | Not Available | Positive | 1232117 - 1232386 | 10135.2 |
| cytochrome c biogenesis protein ccda | AO062_05600 | Not Available | Negative | 1232435 - 1233352 | 33432.5 |
| dihydroxy-acid dehydratase | AO062_05605 | Not Available | Negative | 1233362 - 1235098 | 61833.3 |
| abc transporter permease | AO062_05610 | Not Available | Negative | 1235109 - 1236143 | 36231.3 |
| sugar abc transporter permease | AO062_05615 | Not Available | Negative | 1236140 - 1237174 | 36046.3 |
| sugar abc transporter atp-binding protein | AO062_05620 | Not Available | Negative | 1237171 - 1238691 | 54208.0 |
| abc transporter permease | AO062_05625 | Not Available | Negative | 1238696 - 1239904 | 42454.4 |
| abc transporter atp-binding protein | AO062_05630 | Not Available | Negative | 1239891 - 1241417 | 55252.4 |
| sugar abc transporter substrate-binding protein | AO062_05635 | Not Available | Negative | 1241450 - 1242520 | 38497.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
