Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twitching motility protein pilt | AO062_00535 | Not Available | Negative | 107380 - 107793 | 15139.1 |
| prevent-host-death protein | AO062_00540 | Not Available | Negative | 107807 - 108064 | 9615.66 |
| transcription accessory protein | AO062_00545 | Not Available | Negative | 108130 - 110505 | 86594.3 |
| histidine kinase | AO062_00550 | Not Available | Negative | 110585 - 111550 | 35361.2 |
| luxr family transcriptional regulator | AO062_00555 | Not Available | Negative | 111591 - 112385 | 29046.9 |
| hypothetical protein | AO062_00560 | Not Available | Positive | 112765 - 113457 | 20152.7 |
| hypothetical protein | AO062_00570 | Not Available | Positive | 114600 - 114938 | 12263.7 |
| hypothetical protein | AO062_00575 | Not Available | Positive | 115030 - 115539 | 19548.8 |
| arsr family transcriptional regulator | AO062_00580 | Not Available | Positive | 115596 - 115958 | 13918.5 |
| asnc family transcriptional regulator | AO062_00585 | Not Available | Positive | 115955 - 116395 | 15807.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
