Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspf | AO062_05440 | Not Available | Positive | 1195539 - 1196783 | 43687.0 |
| 5'-nucleotidase | AO062_05445 | Not Available | Positive | 1196806 - 1197705 | 33057.6 |
| hypothetical protein | AO062_05450 | Not Available | Positive | 1198163 - 1198345 | 6068.41 |
| phospholipase | AO062_05455 | Not Available | Positive | 1198378 - 1200615 | 82240.1 |
| lysr family transcriptional regulator | AO062_05460 | Not Available | Positive | 1200664 - 1201566 | 32316.3 |
| purine permease | AO062_05465 | Not Available | Positive | 1201685 - 1203100 | 48679.9 |
| hydroxydechloroatrazine ethylaminohydrolase | AO062_05470 | Not Available | Positive | 1203097 - 1204533 | 51327.4 |
| alcohol dehydrogenase | AO062_05475 | Not Available | Negative | 1204555 - 1205853 | 45901.7 |
| cytochrome c | AO062_05480 | Not Available | Negative | 1205861 - 1206586 | 25540.9 |
| hypothetical protein | AO062_05485 | Not Available | Negative | 1206586 - 1206774 | 6507.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
