Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspg | AO062_05390 | Not Available | Positive | 1186039 - 1186479 | 16030.3 |
| type ii secretion system protein gsph | AO062_05395 | Not Available | Positive | 1186454 - 1186960 | 17434.3 |
| type ii secretion system protein gspi | AO062_05400 | Not Available | Positive | 1186957 - 1187337 | 13302.3 |
| general secretion pathway protein j | AO062_05405 | Not Available | Positive | 1187337 - 1188017 | 24345.2 |
| general secretion pathway protein gspk | AO062_05410 | Not Available | Positive | 1188014 - 1189051 | 36298.3 |
| general secretion pathway protein gspl | AO062_05415 | Not Available | Positive | 1189183 - 1190394 | 43011.0 |
| general secretion pathway protein gspm | AO062_05420 | Not Available | Positive | 1190391 - 1190942 | 19457.7 |
| general secretion pathway protein gspn | AO062_05425 | Not Available | Positive | 1190966 - 1191769 | 28370.1 |
| type ii secretion system protein gspd | AO062_05430 | Not Available | Positive | 1191777 - 1194110 | 81203.9 |
| type ii secretion system protein gspe | AO062_05435 | Not Available | Positive | 1194138 - 1195529 | 49958.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
