Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO062_05340 | Not Available | Negative | 1174239 - 1175819 | 57989.5 |
| amidohydrolase | AO062_05345 | Not Available | Negative | 1175851 - 1177125 | 44686.6 |
| abc transporter permease | AO062_05350 | Not Available | Negative | 1177127 - 1178107 | 36001.5 |
| porin | AO062_05355 | Not Available | Negative | 1178292 - 1179515 | 42576.8 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | AO062_05360 | Not Available | Positive | 1179798 - 1180427 | 22520.9 |
| osmotically inducible protein c | AO062_05365 | Not Available | Negative | 1180456 - 1180905 | 15816.0 |
| porin | AO062_05370 | Not Available | Positive | 1181178 - 1182458 | 44898.5 |
| hypothetical protein | AO062_05375 | Not Available | Negative | 1182553 - 1183683 | 42541.2 |
| threonine dehydratase | AO062_05380 | Not Available | Positive | 1183745 - 1185322 | 57067.6 |
| hypothetical protein | AO062_05385 | Not Available | Negative | 1185356 - 1185988 | 21039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
