Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | AO062_05240 | Not Available | Negative | 1151214 - 1152038 | 30084.4 |
| sugar abc transporter permease | AO062_05245 | Not Available | Negative | 1152049 - 1152906 | 32132.4 |
| sugar abc transporter substrate-binding protein | AO062_05250 | Not Available | Negative | 1152965 - 1154275 | 47424.0 |
| lysr family transcriptional regulator | AO062_05255 | Not Available | Negative | 1154459 - 1155364 | 32688.9 |
| abc transporter substrate-binding protein | AO062_05260 | Not Available | Positive | 1155488 - 1156468 | 33865.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | AO062_05265 | Not Available | Positive | 1156511 - 1157572 | 37118.7 |
| hypothetical protein | AO062_05270 | Not Available | Negative | 1157631 - 1157963 | 12255.0 |
| glucose-6-phosphate isomerase | AO062_05275 | Not Available | Negative | 1158137 - 1159690 | 56345.9 |
| transaldolase | AO062_05280 | Not Available | Negative | 1159693 - 1160649 | 34412.1 |
| lipocalin | AO062_05285 | Not Available | Positive | 1160892 - 1161563 | 24459.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
